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software [2014/03/27 11:56]
dmjordan 		software [2015/11/24 19:23]
cassa
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 We develop and maintain a variety of software and web services. We develop and maintain a variety of software and web services.
  
-===Functional Prediction of Genetic Variants===+===Tools for Assessment of Variants===
   * [[http://genetics.bwh.harvard.edu/pph2|PolyPhen-2]] is a tool for predicting the effect of an amino acid substitution on protein structure and function, based on comparative genomics and experimentally determined protein structures. It is available as a web service, and can also be downloaded as a standalone application.   * [[http://genetics.bwh.harvard.edu/pph2|PolyPhen-2]] is a tool for predicting the effect of an amino acid substitution on protein structure and function, based on comparative genomics and experimentally determined protein structures. It is available as a web service, and can also be downloaded as a standalone application.
 +  * [[http://genetics.bwh.harvard.edu/snptrack|SNPtrack]] is a simple interface for mutation mapping and identifying causal mutations from whole-genome sequencing studies. It is available as a web service.
   * [[http://genetics.bwh.harvard.edu/scone/|SCONE]] is a tool for predicting the effect of noncoding variation on regulatory sequences based on evolutionary conservation. It is available for download as a standalone application.   * [[http://genetics.bwh.harvard.edu/scone/|SCONE]] is a tool for predicting the effect of noncoding variation on regulatory sequences based on evolutionary conservation. It is available for download as a standalone application.