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resources [2023/01/30 22:51] – cassa | resources [2023/01/30 22:51] (current) – cassa |
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[[https://github.com/cassalab/tocayo|Tocayo]] is a pipeline for analyzing sequence variants which have evidence of pathogenicity according to the PS1, PM5, and PVS1 guidelines specified by the ACMG/AMP. Specifically, the pipeline is meant to analyze VUS in ClinVar and other unclassified nsSNVs. | [[https://github.com/cassalab/tocayo|Tocayo]] is a pipeline for analyzing sequence variants which have evidence of pathogenicity according to the PS1, PM5, and PVS1 guidelines specified by the ACMG/AMP. Specifically, the pipeline is meant to analyze VUS in ClinVar and other unclassified nsSNVs. |
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**FUSE: | **FUSE:** |
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[[https://github.com/cassalab/fuse|FUSE]] is a pipeline to refine and impute functional assay data. We develop a framework to exploit related measurements within and across experimental assays to jointly estimate variant impact. | [[https://github.com/cassalab/fuse|FUSE]] is a pipeline to refine and impute functional assay data. We develop a framework to exploit related measurements within and across experimental assays to jointly estimate variant impact. |